| Battle Creek | McCook, SD | 6 miles | SE |
| Little Vermillion River | McCook, SD | 9.9 miles | NE |
| East Fork Vermillion River | Turner, SD | 18 miles | SE |
| West Fork Vermillion River | Turner, SD | 18 miles | SE |
| West Branch Skunk Creek | Minnehaha, SD | 19.2 miles | NE |
| Colton Creek | Minnehaha, SD | 20.1 miles | NE |
| Elce Creek | Turner, SD | 21 miles | SE |
| Elm Creek | Hutchinson, SD | 21.7 miles | SW |
| Camp Creek | Turner, SD | 22.4 miles | SE |
| Willow Creek | Minnehaha, SD | 23.7 miles | SE |
| Wolf Creek | Hutchinson, SD | 24.1 miles | SW |
| Wolf Drain | Lake, SD | 25.3 miles | NE |
| North Buffalo Creek | Lake, SD | 26 miles | NE |
| Negro Creek | Lake, SD | 26.6 miles | NE |
| Skunk Creek | Minnehaha, SD | 26.6 miles | SE |
| Bloom Creek | Hanson, SD | 26.6 miles | SW |
| Plum Creek | Hutchinson, SD | 27.4 miles | SW |
| Pierre Creek | Hanson, SD | 27.6 miles | NW |
| Dry Creek | Hutchinson, SD | 27.6 miles | SW |
| Buffalo Creek | Lake, SD | 27.8 miles | NE |
| Hurley Creek | Turner, SD | 27.9 miles | SE |
| Twelvemile Creek | Hutchinson, SD | 28 miles | SW |
| Silver Creek | Minnehaha, SD | 28.1 miles | NE |
| Park Creek | Lake, SD | 28.3 miles | NE |
| Pony Creek | Hutchinson, SD | 28.4 miles | SW |
| South Fork Twelvemile Creek | Hutchinson, SD | 28.8 miles | SW |
| Furlong Creek | Hutchinson, SD | 29.3 miles | SW |
| Johnson Creek | Hanson, SD | 29.4 miles | NW |
| Silver Creek | Lake, SD | 29.4 miles | NE |
| Pooley Creek | Miner, SD | 29.7 miles | NW |
| Enemy Creek | Hanson, SD | 30.2 miles | NW |
| South Branch Dry Creek | Hutchinson, SD | 31.1 miles | SW |
| North Branch Dry Creek | Hutchinson, SD | 31.3 miles | SW |
| South Branch Lonetree Creek | Hutchinson, SD | 31.9 miles | SW |
| Lonetree Creek | Hutchinson, SD | 32 miles | SW |
| Slip-up Creek | Minnehaha, SD | 32 miles | NE |
| Coffee Creek | Hutchinson, SD | 33.1 miles | SW |
| Saddle Creek | Lincoln, SD | 33.2 miles | SE |
| Dawson Creek | Bon Homme, SD | 33.3 miles | SW |
| Prairie Creek | Yankton, SD | 34.1 miles | SW |
| Long Creek | Turner, SD | 34.1 miles | SE |
| Firesteel Creek | Davison, SD | 34.4 miles | NW |
| Dry Run | Davison, SD | 34.6 miles | NW |
| Haram Creek | Lincoln, SD | 34.7 miles | SE |
| Snake Creek | Lincoln, SD | 34.7 miles | SE |
| Split Rock Creek | Rock, MN | 35 miles | SE |
| Split Rock Creek | Rock, SD | 35 miles | SE |
| Split Rock Creek | Minnehaha, MN | 35 miles | SE |
| Split Rock Creek | Minnehaha, SD | 35 miles | SE |
| Rock Creek | Hanson, SD | 35.2 miles | NW |
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